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Details of CancerPDF entry with Sequence SGPRRYTIAALLSPYSYSTTAVVTNPKE
Primary information
sequence IDSeq_7146
Peptide sequenceSGPRRYTIAALLSPYSYSTTAVVTNPKE
CancerPDF_ID CancerPDF_ID8647, CancerPDF_ID9913,
PMID19674866,21533267
Protein NameTransthretin ( Cterminal fragment of protein TTHY),Transthyretin
UniprotKB Entry NameTTHY_HUMAN,TTHY_HUMAN
FluidCerbrospinal fluid,Serum
M/ZNA,761.42
Charge1,4
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueMALDI-TOF,LC-MS
Peptide Identification techniquenanoESI-qTOF-MS/MS,LC/MS/MS
Quantification TechniqueQ/TOF/MS,Multiple Reaction Monitoring
Labelled/Label FreeLabel Free,Label Free
FDRNA,1.49
CancerPDF_ID CancerPDF_ID8647, CancerPDF_ID9913,
p-Value0.05,NA
SoftwareMASCOT,MASCOT
Length28,28
Cancer TypeGlioblastoma (Malignant brain tumor),Lung adenocarcinoma
DatabaseSwissProt Database and MSDB.,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients11 patient with glioblastoma,62 lung adenocarcinoma and 30 healthy control
RegulationUpregulated in cancer as compare to normal control,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB