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Details of CancerPDF entry with Sequence SDNQLQEGKNVIGLQ
Primary information
sequence IDSeq_6944
Peptide sequenceSDNQLQEGKNVIGLQ
CancerPDF_ID CancerPDF_ID831, CancerPDF_ID9882,
PMID19795908,21533267
Protein NameTransgelin-2,Transgelin-2
UniprotKB Entry NameTAGL2_HUMAN,TAGL2_HUMAN
FluidPlasma,Serum
M/Z821.92,821.91
Charge2,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1.49
CancerPDF_ID CancerPDF_ID831, CancerPDF_ID9882,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT
Length15,15
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients"35 normal, 15 patients",62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB