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Details of CancerPDF entry with Sequence RNVSTGDVNVE
Primary information
sequence IDSeq_6666
Peptide sequenceRNVSTGDVNVE
CancerPDF_ID CancerPDF_ID9211, CancerPDF_ID9822, CancerPDF_ID12074,
PMID24694173,21533267,26992070
Protein Name"Keratin, type I cytoskeletal 10","Keratin, type I cytoskeletal 10","Keratin, type I cytoskeletal 10"
UniprotKB Entry NameK1C10_HUMAN,K1C10_HUMAN,K1C10_HUMAN
FluidAscites fluid,Serum,Serum
M/ZNA,595.3,1188.5735
Charge1,2,NA
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLTQ-Orbitrap XL,LC-MS,LC-MS
Peptide Identification techniqueX tandem for peptide identification,LC/MS/MS,LC-MS/MS
Quantification TechniqueNA,Multiple Reaction Monitoring,NA
Labelled/Label FreeLabel Free,Label Free,Label Free
FDRNA,1.49,FDR 1 %
CancerPDF_ID CancerPDF_ID9211, CancerPDF_ID9822, CancerPDF_ID12074,
p-ValueNA,NA,NA
Software"X tandem for peptide identification,Scaffold 2 software for any modification analysis",MASCOT,SEQUEST and Maxquant
Length11,11,11
Cancer TypeOvarian cancer,Lung adenocarcinoma,Melanoma
DatabaseIPI00009865,Swissprot Database (57.4),SwissProt Database
ModificationNA,NA,NA
Number of Patients3 ovarian cancer patient and 3 non cancerous control,62 lung adenocarcinoma and 30 healthy control,8 cancer samples and 4 healthy samples
RegulationUniquely expressed in ovarian cancer patient,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal","Present in 5 cancer samples out of 8 cancer samples. ,Present in 4 healthy samples out of 4 healthy samples."
ValidationNA,MRM-based validation of 19 candidates,na
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB440063