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Details of CancerPDF entry with Sequence REEAPSLRPAPPPISGGGY
Primary information
sequence IDSeq_6518
Peptide sequenceREEAPSLRPAPPPISGGGY
CancerPDF_ID CancerPDF_ID846, CancerPDF_ID2121, CancerPDF_ID2776,
PMID19795908,21136997,21136997
Protein NameFibrinogen beta chain,Fibrinogen beta,Fibrinogen beta chain
UniprotKB Entry NameFIBB_HUMAN,F1BB_HUMAN,FIBB_HUMAN
FluidPlasma,Serum,Plasma
M/Z651,1949.99592,1949.9959
Charge3,1,1
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,NA,NA
CancerPDF_ID CancerPDF_ID846, CancerPDF_ID2121, CancerPDF_ID2776,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01)
Length19,19,19
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal
DatabaseNCBI refseq Protein Database,SwissProt Database,SwissProt Database
ModificationNA,NA,NA
Number of Patients"42 normal, 26 patients",30 patients and 30 healthy controls,27 healthy individuals
RegulationNA,NA,NA
ValidationNA,Leave One out Cross validation,Leave One out Cross validation
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB