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Details of CancerPDF entry with Sequence PGVLSSRQL
Primary information
sequence IDSeq_5944
Peptide sequencePGVLSSRQL
CancerPDF_ID CancerPDF_ID801, CancerPDF_ID9799,
PMID19795908,21533267
Protein NameInter-alpha-trypsin inhibitor heavy chain H4,Inter-alpha-trypsin inhibitor heavy chain H4
UniprotKB Entry NameITIH4_HUMAN,ITIH4_HUMAN
FluidPlasma,Serum
M/Z478.77,478.77
Charge2,2
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC/MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),Multiple Reaction Monitoring
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1.49
CancerPDF_ID CancerPDF_ID801, CancerPDF_ID9799,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT
Length9,9
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Lung adenocarcinoma
DatabaseNCBI refseq Protein Database,Swissprot Database (57.4)
ModificationNA,NA
Number of Patients"42 normal, 28 patients",62 lung adenocarcinoma and 30 healthy control
RegulationNA,"Differentially expressed between earlier-stage lung cancer group (stage-I, II, and IIIa) vs normal"
ValidationNA,MRM-based validation of 19 candidates
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB