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Details of CancerPDF entry with Sequence PGDDNNDIAPR
Primary information
sequence IDSeq_5916
Peptide sequencePGDDNNDIAPR
CancerPDF_ID CancerPDF_ID11976,
PMID26992070
Protein NameCollagen alpha-1(VI) chain
UniprotKB Entry NameCO6A1_HUMAN
FluidSerum
M/Z1182.5265
Mass (in Da)1183.533495
Profiling TechniqueLC-MS
Peptide Identification techniqueLC-MS/MS
Labelled/Label FreeLabel Free
FDRFDR 1 %
CancerPDF_ID CancerPDF_ID11976,
p-ValueNA
SoftwareSEQUEST and Maxquant
Length11
Cancer TypeMelanoma
DatabaseSwissProt Database
ModificationNA
Number of Patients8 cancer samples and 4 healthy samples
Regulation"Present in 4 cancer samples out of 8 cancer samples. ,Present in 3 healthy samples out of 4 healthy samples."
Validationna
SensitivityNA
SpecificityNA
AccuracyNA
Peptide AtlasPeptideAtlas
IEDBNA