Welcome to Sequence Card of Peptide


Details of CancerPDF entry with Sequence HVQPQPQPKPQVQLHVQSQT
Primary information
sequence IDSeq_3581
Peptide sequenceHVQPQPQPKPQVQLHVQSQT
CancerPDF_ID CancerPDF_ID2012, CancerPDF_ID11619,
PMID21136997,26992070
Protein NameZyxin,Zyxin
UniprotKB Entry NameZYX_HUMAN,NA
FluidSerum,Serum
M/Z2303.21346,NA
Charge1,NA
Mass (in Da)NA,2304.222812
fdrNA,NA
Profiling TechniqueLC-MS,LC-MS
Peptide Identification techniqueLC-MS-MS/MS,LC-MS/MS
Quantification TechniqueLC-ESI-MS,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID2012, CancerPDF_ID11619,
p-ValueNA,NA
SoftwareMASCOT(v. 2.2.01),SEQUEST and Maxquant
Length20,20
Cancer TypeColorectal cancer,Melanoma
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients30 patients and 30 healthy controls,8 cancer samples and 4 healthy samples
RegulationNA,"Present in 4 cancer samples out of 8 cancer samples. ,Present in 0 healthy samples out of 4 healthy samples."
ValidationLeave One out Cross validation,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB