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Details of CancerPDF entry with Sequence HTDLSGKVFVFPRE
Primary information
sequence IDSeq_3544
Peptide sequenceHTDLSGKVFVFPRE
CancerPDF_ID CancerPDF_ID10235, CancerPDF_ID11605,
PMID21805675,26992070
Protein NameSerum amyloid P-component,Serum amyloid P-component
UniprotKB Entry NameSAMP_HUMAN,SAMP_HUMAN
FluidUrine,Serum
M/Z1631.8474,NA
ChargeNA,NA
Mass (in Da)NA,1631.856968
fdrNA,NA
Profiling TechniqueMALDI-TOF,LC-MS
Peptide Identification techniqueMALDI-TOF-MS,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDR1,FDR 1 %
CancerPDF_ID CancerPDF_ID10235, CancerPDF_ID11605,
p-ValueNA,NA
SoftwareNA,SEQUEST and Maxquant
Length14,14
Cancer TypeMuscle-invasive bladder cancer,Melanoma
DatabaseSwissProt Database,SwissProt Database
ModificationNA,NA
Number of Patients751 bladder cancer and 127 control,8 cancer samples and 4 healthy samples
RegulationDifferentially expressed between cancer vs normal samples,"Present in 3 cancer samples out of 8 cancer samples. ,Present in 0 healthy samples out of 4 healthy samples."
ValidationMann-Whitney tests and areas under receiver-operator characteristic,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB