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Details of CancerPDF entry with Sequence HNLGHGHKHERDQGHGHQ
Primary information
sequence IDSeq_3486
Peptide sequenceHNLGHGHKHERDQGHGHQ
CancerPDF_ID CancerPDF_ID3231, CancerPDF_ID8616, CancerPDF_ID8642, CancerPDF_ID12749,
PMID21136997,26705257,24416269,27058005
Protein NameKininogen-1,Isoform HMW of kininogen-1 (KNG1) precursor,"Kininogen L,high MW",Kininogen-1
UniprotKB Entry NameKNG1_HUMAN,KNG1_HUMAN,KNG1_HUMAN,KNG1_HUMAN
FluidPlasma,Serum,Plasma,Serum
M/Z2079.9596,2082.04,2080.98,2081.006
Charge1,NA,NA,NA
Mass (in Da)NA,NA,NA,NA
fdrNA,NA,NA,NA
Profiling TechniqueLC-MS,MALDI-TOF,MALDI-TOF,MALDI-TOF
Peptide Identification techniqueLC-MS-MS/MS,LC-ESI-MS/MS,MS/MS,LC-MS/MS
Quantification TechniqueLC-ESI-MS,NA,Affinity Chromatography,NA
Labelled/Label FreeLabel Free,Label Free,Label Free,Label Free
FDRNA,NA,NA,NA
CancerPDF_ID CancerPDF_ID3231, CancerPDF_ID8616, CancerPDF_ID8642, CancerPDF_ID12749,
p-ValueNA,1.00E-06,less than 0.05,"less than 0.01,0.242,less than 0.05"
SoftwareMASCOT(v. 2.2.01),ClinProTools,MASCOT and Markerview software version 1.2,Proteome Discoverer
Length18,18,18,18
Cancer TypeNormal,Breast cancer,Cervical cancer,Breast cancer
DatabaseSwissProt Database,Uniprot protein sequence Database,NA,SwissProt Database
ModificationNA,NA,NA,NA
Number of Patients27 healthy individuals,96 Breast Cancer patients and 64 healthy controls,67 patients and 4 healthy," 28 were diagnosed with Breast cancer, 27 remained cancer-free with BRCA carrier. Of the remaining patients, 39 were diagnosed with sporadic breast cancer (SBC), and 38 were healthy volunteers (WT)."
RegulationNA,Upregulated in cancer as compare to normal control with fold change of 1.9,Differential expression,"Upregulated with the fold change of 0.43 in breast cancer vs Cancer free patients with brca mutation, Upregulated in breast cancer vs sporadic breast cancer with fold change of 0.71, Upregulated in BC vs healthy with 1.565 fold change"
ValidationLeave One out Cross validation,NA,NA,NA
SensitivityNA,NA,NA,NA
SpecificityNA,NA,NA,NA
AccuracyNA,NA,NA,NA
Peptide AtlasNA
IEDB