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Details of CancerPDF entry with Sequence GSTGSWNSGSSGTGSTGNQNPGSPRPGSTGT
Primary information
sequence IDSeq_3214
Peptide sequenceGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGT
CancerPDF_ID CancerPDF_ID496, CancerPDF_ID8917,
PMID19795908,24694173
Protein NameFibrinogen alpha chain,Isoform 1 of Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidPlasma,Ascites fluid
M/Z946.41,NA
Charge3,1
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,LTQ-Orbitrap XL
Peptide Identification techniqueMALDI-TOF/TOF,X tandem for peptide identification
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,NA
CancerPDF_ID CancerPDF_ID496, CancerPDF_ID8917,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,"X tandem for peptide identification,Scaffold 2 software for any modification analysis"
Length31,31
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Ovarian cancer
DatabaseNCBI refseq Protein Database,"IPI00021885,IPI00029717"
ModificationNA,NA
Number of Patients"42 normal, 28patients",3 ovarian cancer patient and 3 non cancerous control
RegulationNA,Uniquely expressed in ovarian cancer patient
ValidationNA,NA
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB