Primary information |
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sequence ID | Seq_3080 |
Peptide sequence | GQDGRPGPPGPPG |
CancerPDF_ID | CancerPDF_ID8635, CancerPDF_ID10779, |
PMID | 24416269,21805675 |
Protein Name | Alpha-1 type I collagen,Collagen alpha-1(I) chain |
UniprotKB Entry Name | COA1_HUMAN,CO1A1_HUMAN |
Fluid | Urine,Urine |
M/Z | 1236.56,1236.5608 |
Charge | NA,NA |
Mass (in Da) | NA,NA |
fdr | NA,NA |
Profiling Technique | MALDI-TOF,MALDI-TOF |
Peptide Identification technique | MS/MS,MALDI-TOF-MS |
Quantification Technique | Affinity Chromatography,NA |
Labelled/Label Free | Label Free,Label Free |
FDR | NA,1 |
CancerPDF_ID | CancerPDF_ID8635, CancerPDF_ID10779, |
p-Value | less than 0.05,NA |
Software | MASCOT and Markerview software version 1.2,NA |
Length | 13,13 |
Cancer Type | Cervical cancer,Muscle-invasive bladder cancer |
Database | NA,SwissProt Database |
Modification | Hydroxylation of Pro,"Oxidation: 6, 9, 12" |
Number of Patients | 67 patients and 4 healthy,751 bladder cancer and 127 control |
Regulation | Downregulated in cancer vs normal,Differentially expressed between cancer vs normal samples |
Validation | NA,Mann-Whitney tests and areas under receiver-operator characteristic |
Sensitivity | NA,NA |
Specificity | NA,NA |
Accuracy | NA,NA |
Peptide Atlas | NA |
IEDB | |