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Details of CancerPDF entry with Sequence FLAEGGG
Primary information
sequence IDSeq_2211
Peptide sequenceFLAEGGG
CancerPDF_ID CancerPDF_ID8513, CancerPDF_ID11447,
PMID23667664,26992070
Protein NameFibrinogen alpha,Fibrinogen alpha chain
UniprotKB Entry NameFIBA_HUMAN,FIBA_HUMAN
FluidSerum,Serum
M/Z649.31,649.30714
Charge1,NA
Mass (in Da)650.71,NA
fdrNA,NA
Profiling TechniqueMALDI-TOF,LC-MS
Peptide Identification techniqueFT-ICR MS/MS + nano-HPLC,LC-MS/MS
Quantification TechniqueNA,NA
Labelled/Label FreeLabel Free,Label Free
FDRNA,FDR 1 %
CancerPDF_ID CancerPDF_ID8513, CancerPDF_ID11447,
p-ValueNA,NA
SoftwareMASCOT,SEQUEST and Maxquant
Length7,7
Cancer Type"Breast cancer, Lung cancer, Rectal cancer",Melanoma
DatabaseNA,SwissProt Database
ModificationNA,NA
Number of Patients"Breast Cancer =84, lung cancer= 70, Rectal cancer = 30patients; 500 healthy",8 cancer samples and 4 healthy samples
RegulationNA,"Present in 7 cancer samples out of 8 cancer samples. ,Present in 3 healthy samples out of 4 healthy samples."
ValidationNA,na
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasNA
IEDB437539 462581