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Details of CancerPDF entry with Sequence EEAPSLRPAPPPISGGG
Primary information
sequence IDSeq_1728
Peptide sequenceEEAPSLRPAPPPISGGG
CancerPDF_ID CancerPDF_ID849, CancerPDF_ID10233,
PMID19795908,21805675
Protein NameFibrinogen beta chain,Fibrinogen beta chain
UniprotKB Entry NameFIBB_HUMAN,FIBB_HUMAN
FluidPlasma,Urine
M/Z816.41,1631.8263
Charge2,NA
Mass (in Da)NA,NA
fdrNA,NA
Profiling TechniqueLC-MS,MALDI-TOF
Peptide Identification techniqueMALDI-TOF/TOF,MALDI-TOF-MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),NA
Labelled/Label FreeLabelled,Label Free
FDRless than 7%,1
CancerPDF_ID CancerPDF_ID849, CancerPDF_ID10233,
p-ValueNA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,NA
Length17,17
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Muscle-invasive bladder cancer
DatabaseNCBI refseq Protein Database,SwissProt Database
ModificationNA,NA
Number of Patients"42 normal, 26 patients",751 bladder cancer and 127 control
RegulationNA,Differentially expressed between cancer vs normal samples
ValidationNA,Mann-Whitney tests and areas under receiver-operator characteristic
SensitivityNA,NA
SpecificityNA,NA
AccuracyNA,NA
Peptide AtlasPeptideAtlas
IEDB