Primary information |
---|
sequence ID | Seq_1270 |
Peptide sequence | DGESGRPGRPGERGLPGPPG |
CancerPDF_ID | CancerPDF_ID10850, CancerPDF_ID10851, |
PMID | 21805675,21805675 |
Protein Name | Collagen alpha-1(III) chain,Collagen alpha-1(III) chain |
UniprotKB Entry Name | CO3A1_HUMAN,CO3A1_HUMAN |
Fluid | Urine,Urine |
M/Z | 1992.9404,2008.9332 |
Charge | NA,NA |
Mass (in Da) | NA,NA |
fdr | NA,NA |
Profiling Technique | MALDI-TOF,MALDI-TOF |
Peptide Identification technique | MALDI-TOF-MS,MALDI-TOF-MS |
Quantification Technique | NA,NA |
Labelled/Label Free | Label Free,Label Free |
FDR | 1,1 |
CancerPDF_ID | CancerPDF_ID10850, CancerPDF_ID10851, |
p-Value | NA,NA |
Software | NA,NA |
Length | 20,20 |
Cancer Type | Muscle-invasive bladder cancer,Muscle-invasive bladder cancer |
Database | SwissProt Database,SwissProt Database |
Modification | "Oxidation: 10, 16, 19","Oxidation: 7, 10, 16, 19" |
Number of Patients | 751 bladder cancer and 127 control,751 bladder cancer and 127 control |
Regulation | Differentially expressed between cancer vs normal samples,Differentially expressed between cancer vs normal samples |
Validation | Mann-Whitney tests and areas under receiver-operator characteristic,Mann-Whitney tests and areas under receiver-operator characteristic |
Sensitivity | NA,NA |
Specificity | NA,NA |
Accuracy | NA,NA |
Peptide Atlas | NA |
IEDB | |
Primary information |
---|
sequence ID | Seq_1272 |
Peptide sequence | DGESGRpGRpGERGLpGPpG |
CancerPDF_ID | CancerPDF_ID3412, |
PMID | 21591268 |
Protein Name | Collagen alpha-1(III) chain |
UniprotKB Entry Name | CO3A1_HUMAN |
Fluid | Urine |
fdr | 2007.95 |
Profiling Technique | CE-MS-TOF |
Peptide Identification technique | MS/MS |
Labelled/Label Free | Label Free |
CancerPDF_ID | CancerPDF_ID3412, |
p-Value | NA |
Software | MASCOT |
Length | 20 |
Cancer Type | Bladder cancer |
Database | SwissProt protein database |
Modification | p:Hydroxy-Proline |
Number of Patients | 334 Patients |
Regulation | Upregulated in cancer vs normal |
Validation | Cross-validation |
Sensitivity | NA |
Specificity | NA |
Accuracy | NA |
Peptide Atlas | NA |
IEDB | NA |