Primary information |
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sequence ID | Seq_1184 |
Peptide sequence | DDPDAPLQPVTPLQLFEG |
CancerPDF_ID | CancerPDF_ID897, CancerPDF_ID1906, CancerPDF_ID8743, |
PMID | 19795908,21136997,24694173 |
Protein Name | Complement C4-B,Complement C4-B,Complement C4-A |
UniprotKB Entry Name | CO4B_HUMAN,CO4B_HUMAN,CO4A_HUMAN |
Fluid | Plasma,Serum,Ascites fluid |
M/Z | 976.48,1950.95747,NA |
Charge | 2,1,1 |
Mass (in Da) | NA,NA,NA |
fdr | NA,NA,NA |
Profiling Technique | LC-MS,LC-MS,LTQ-Orbitrap XL |
Peptide Identification technique | MALDI-TOF/TOF,LC-MS-MS/MS,X tandem for peptide identification |
Quantification Technique | LC-MRM (multiple reaction monitoring),LC-ESI-MS,NA |
Labelled/Label Free | Labelled,Label Free,Label Free |
FDR | less than 7%,NA,NA |
CancerPDF_ID | CancerPDF_ID897, CancerPDF_ID1906, CancerPDF_ID8743, |
p-Value | NA,NA,NA |
Software | FlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),"X tandem for peptide identification,Scaffold 2 software for any modification analysis" |
Length | 18,18,18 |
Cancer Type | Ductal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Ovarian cancer |
Database | NCBI refseq Protein Database,SwissProt Database,"IPI00032258,IPI00418163,IPI00643525,IPI00654875,IPI00843913,IPI00887154,IPI00889723,IPI00892547,IPI00892604,IPI00937598" |
Modification | NA,NA,NA |
Number of Patients | "42 normal, 28 patients",30 patients and 30 healthy controls,3 ovarian cancer patient and 3 non cancerous control |
Regulation | NA,NA,Uniquely expressed in ovarian cancer patient |
Validation | NA,Leave One out Cross validation,NA |
Sensitivity | NA,NA,NA |
Specificity | NA,NA,NA |
Accuracy | NA,NA,NA |
Peptide Atlas | PeptideAtlas |
IEDB | |