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Details of CancerPDF entry with Sequence ADDTWEPFASGK
Primary information
sequence IDSeq_154
Peptide sequenceADDTWEPFASGK
CancerPDF_ID CancerPDF_ID334, CancerPDF_ID2106, CancerPDF_ID3201,
PMID19795908,21136997,21136997
Protein NameTransthyretin,Transthyretin,Transthyretin
UniprotKB Entry NameTTHY_HUMAN,TTHY_HUMAN,TTHY_HUMAN
FluidPlasma,Serum,Plasma
M/Z662.293,1322.5779,1322.5779
Charge2,1,1
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,NA,NA
CancerPDF_ID CancerPDF_ID334, CancerPDF_ID2106, CancerPDF_ID3201,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01)
Length12,12,12
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal
DatabaseNCBI refseq Protein Database,SwissProt Database,SwissProt Database
ModificationNA,NA,NA
Number of Patients"41 normal, 24 patients",30 patients and 30 healthy controls,27 healthy individuals
RegulationNA,NA,NA
ValidationNA,Leave One out Cross validation,Leave One out Cross validation
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB