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Details of CancerPDF entry with Sequence AATVGSLAGQPLQER
Primary information
sequence IDSeq_125
Peptide sequenceAATVGSLAGQPLQER
CancerPDF_ID CancerPDF_ID322, CancerPDF_ID1689, CancerPDF_ID2962,
PMID19795908,21136997,21136997
Protein NameApolipoprotein E,Apolipoprotein E,Apolipoprotein E
UniprotKB Entry NameAPOE_HUMAN,APOE_HUMAN,APOE_HUMAN
FluidPlasma,Serum,Plasma
M/Z749.4015,1496.79471,1496.7947
Charge2,1,1
Mass (in Da)NA,NA,NA
fdrNA,NA,NA
Profiling TechniqueLC-MS,LC-MS,LC-MS
Peptide Identification techniqueMALDI-TOF/TOF,LC-MS-MS/MS,LC-MS-MS/MS
Quantification TechniqueLC-MRM (multiple reaction monitoring),LC-ESI-MS,LC-ESI-MS
Labelled/Label FreeLabelled,Label Free,Label Free
FDRless than 7%,NA,NA
CancerPDF_ID CancerPDF_ID322, CancerPDF_ID1689, CancerPDF_ID2962,
p-ValueNA,NA,NA
SoftwareFlexAnalysis 3.0 and Biotools 3.0 software,MASCOT(v. 2.2.01),MASCOT(v. 2.2.01)
Length15,15,15
Cancer TypeDuctal adenocarcinoma of the pancreas (DAP),Colorectal cancer,Normal
DatabaseNCBI refseq Protein Database,SwissProt Database,SwissProt Database
ModificationNA,NA,NA
Number of Patients"41 normal, 28 patients",30 patients and 30 healthy controls,27 healthy individuals
RegulationNA,NA,NA
ValidationNA,Leave One out Cross validation,Leave One out Cross validation
SensitivityNA,NA,NA
SpecificityNA,NA,NA
AccuracyNA,NA,NA
Peptide AtlasPeptideAtlas
IEDB