1CN3 Viral Protein date May 24, 1999
title Interaction Of Polyomavirus Internal Protein Vp2 With Major Capsid Protein Vp1 And Implications For Participation Of Vp2 In Viral Entry
authors X.Chen, T.Stehle, S.C.Harrison
compound source
Molecule: Coat Protein Vp1
Chain: A, B, C, D, E
Fragment: Residues 35-317
Engineered: Yes
Biological_unit: Pentamer
 Organism_scientific: Polyoma Virus
Expression_system: Erinaceus Europaeus

Molecule: Fragment Of Coat Protein Vp2
Chain: F
Fragment: Residues 279-297
Engineered: Yes
Synthetic: Yes
Other_details: Sequence From Coat Protein Vp2
symmetry Space Group: P 31 2 1
R_factor 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
219.000 219.000 99.000 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.2 Å
related structures by homologous chain: 1VPN
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (253 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1CN3
  • Likely Quarternary Molecular Structure file(s) for 1CN3
  • Retrieve 1CN3 in mmCIF format [Save to disk]
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    • Visual 3D analysis of 1CN3
  • STING, shows the sequence and maps the locations of sequence residues or residue ranges onto the 3D structure.
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  • Cartoon representation from PDB Cartoon
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cn3a_, region A: [rasmolscript] [script source]
        - Domain d1cn3b_, region B: [rasmolscript] [script source]
        - Domain d1cn3c_, region C: [rasmolscript] [script source]
        - Domain d1cn3d_, region D: [rasmolscript] [script source]
        - Domain d1cn3e_, region E: [rasmolscript] [script source]
  • Fold representative 1cn3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily: CATH
  • Summaries and structural analyses of PDB data files: PDBSum
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cn3_A] [1cn3_B] [1cn3_C] [1cn3_D] [1cn3_E] [1cn3_F]
    • Other resources with information on 1CN3
  • PDBREPORT (protein verification by WHAT_CHECK procedures)
  • MMDB (Entrez's Structure Database)
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